Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 AC239809.2-201ENST00000415381 517 ntBASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 TSPY20P-201ENST00000450910 630 ntBASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 NBPF21P-201ENST00000425093 1451 ntBASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA9Q9UGM1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 KRT18P16-201ENST00000510337 1294 ntBASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 AL023875.1-201ENST00000640777 796 ntBASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA9Q9UGM1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 RN7SL471P-201ENST00000580476 299 ntBASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA9Q9UGM1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 KRT8P8-201ENST00000434750 1448 ntBASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA9Q9UGM1 AC004264.1-201ENST00000608354 794 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms