Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 AC098590.1-201ENST00000468126 897 ntBASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 RPS2P52-201ENST00000469610 820 ntBASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 C2orf69P4-201ENST00000565394 541 ntBASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 AL162377.1-201ENST00000618844 1793 ntBASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 PTBP1P-201ENST00000554374 1601 ntBASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CALCOCO1Q9P1Z2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 AC079598.2-202ENST00000546624 1451 ntBASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.06■□□□□ 0.96
CALCOCO1Q9P1Z2 DPP3P2-201ENST00000416030 1696 ntBASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CALCOCO1Q9P1Z2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 AL133373.2-201ENST00000623187 2828 ntBASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 AC099778.1-201ENST00000568593 1911 ntBASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.04■□□□□ 0.96
CALCOCO1Q9P1Z2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CALCOCO1Q9P1Z2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CALCOCO1Q9P1Z2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CALCOCO1Q9P1Z2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CALCOCO1Q9P1Z2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CALCOCO1Q9P1Z2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms