Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 C1QL1P1-201ENST00000568105 661 ntBASIC19.35■□□□□ 0.69
TREX1Q9NSU2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TREX1Q9NSU2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TREX1Q9NSU2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TREX1Q9NSU2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 AL049812.1-201ENST00000432563 2267 ntBASIC19.32■□□□□ 0.68
TREX1Q9NSU2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TREX1Q9NSU2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 AC004264.1-201ENST00000608354 794 ntBASIC19.31■□□□□ 0.68
TREX1Q9NSU2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 HLA-A-209ENST00000638375 975 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms