Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TLR9Q9NR96 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TLR9Q9NR96 AP001271.2-201ENST00000624018 1556 ntBASIC20.58■□□□□ 0.88
TLR9Q9NR96 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TLR9Q9NR96 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.58■□□□□ 0.88
TLR9Q9NR96 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 PRSS44-201ENST00000515154 1146 ntBASIC20.57■□□□□ 0.88
TLR9Q9NR96 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TLR9Q9NR96 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TLR9Q9NR96 AC116407.4-201ENST00000623319 1061 ntBASIC20.57■□□□□ 0.88
TLR9Q9NR96 LINC01465-201ENST00000408887 1940 ntBASIC20.57■□□□□ 0.88
TLR9Q9NR96 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 DUSP5P1-201ENST00000441325 1139 ntBASIC20.56■□□□□ 0.88
TLR9Q9NR96 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TLR9Q9NR96 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TLR9Q9NR96 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 KRT8P45-201ENST00000414328 1447 ntBASIC20.55■□□□□ 0.88
TLR9Q9NR96 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AP000523.1-201ENST00000398242 1049 ntBASIC20.55■□□□□ 0.88
TLR9Q9NR96 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 HCG4P8-203ENST00000443049 980 ntBASIC20.55■□□□□ 0.88
TLR9Q9NR96 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.55■□□□□ 0.88
TLR9Q9NR96 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 AC073130.3-201ENST00000624389 2278 ntBASIC20.55■□□□□ 0.88
TLR9Q9NR96 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TLR9Q9NR96 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TLR9Q9NR96 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 KRT8P41-201ENST00000533985 1514 ntBASIC20.54■□□□□ 0.88
TLR9Q9NR96 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TLR9Q9NR96 KRT18P38-201ENST00000449496 1282 ntBASIC20.54■□□□□ 0.88
TLR9Q9NR96 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 AC069148.1-201ENST00000608741 768 ntBASIC20.54■□□□□ 0.88
TLR9Q9NR96 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TLR9Q9NR96 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TLR9Q9NR96 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
TLR9Q9NR96 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms