Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC141586.3-201ENST00000562166 1838 ntBASIC23.77■■□□□ 1.4
UPF2Q9HAU5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPF2Q9HAU5 AC006333.2-201ENST00000607957 2099 ntBASIC23.75■■□□□ 1.39
UPF2Q9HAU5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 KRT18P11-201ENST00000435214 1283 ntBASIC23.75■■□□□ 1.39
UPF2Q9HAU5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPF2Q9HAU5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 AL049812.1-201ENST00000432563 2267 ntBASIC23.74■■□□□ 1.39
UPF2Q9HAU5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 AC007613.1-201ENST00000572811 2597 ntBASIC23.74■■□□□ 1.39
UPF2Q9HAU5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.74■■□□□ 1.39
UPF2Q9HAU5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 AC079598.2-202ENST00000546624 1451 ntBASIC23.73■■□□□ 1.39
UPF2Q9HAU5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPF2Q9HAU5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 AC026471.1-201ENST00000564629 3026 ntBASIC23.72■■□□□ 1.39
UPF2Q9HAU5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UPF2Q9HAU5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms