Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 TSPY20P-201ENST00000450910 630 ntBASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUCKS1Q9H1E3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 AC120498.9-201ENST00000339021 3867 ntBASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 AL138781.2-201ENST00000617896 1843 ntBASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUCKS1Q9H1E3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 AL161938.1-201ENST00000569833 2180 ntBASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NUCKS1Q9H1E3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NUCKS1Q9H1E3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 TEX21P-204ENST00000641479 1693 ntBASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.95■□□□□ 0.94
NUCKS1Q9H1E3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms