Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 KRASP1-201ENST00000407852 552 ntBASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 AL158047.1-201ENST00000445918 881 ntBASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 RN7SL471P-201ENST00000580476 299 ntBASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNPPD1Q9BV87 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNPPD1Q9BV87 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNPPD1Q9BV87 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 NBPF21P-201ENST00000425093 1451 ntBASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNPPD1Q9BV87 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms