Protein–RNA interactions for Protein: Q9BRS2

RIOK1, Serine/threonine-protein kinase RIO1, humanhuman

Known RBP Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1Q9BRS2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 SLC25A1P4-201ENST00000567977 778 ntBASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.12■■□□□ 1.29
RIOK1Q9BRS2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 ZNF815P-204ENST00000434898 1737 ntBASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 RCN1P1-201ENST00000400413 996 ntBASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 LINC01568-207ENST00000641790 1380 ntBASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIOK1Q9BRS2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 MFAP1P1-201ENST00000442257 1255 ntBASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.1■■□□□ 1.29
RIOK1Q9BRS2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.09■■□□□ 1.29
RIOK1Q9BRS2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 TSPY14P-201ENST00000303979 915 ntBASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIOK1Q9BRS2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RIOK1Q9BRS2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 INGX-201ENST00000359239 846 ntBASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIOK1Q9BRS2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIOK1Q9BRS2 SDHAP1-207ENST00000440850 2000 ntBASIC23.06■■□□□ 1.28
RIOK1Q9BRS2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.06■■□□□ 1.28
RIOK1Q9BRS2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.06■■□□□ 1.28
RIOK1Q9BRS2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIOK1Q9BRS2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms