Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
ABCA3Q99758 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
ABCA3Q99758 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 AF106564.1-201ENST00000607058 2553 ntBASIC25.91■■□□□ 1.74
ABCA3Q99758 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 CHCHD2P8-201ENST00000429873 447 ntBASIC25.91■■□□□ 1.74
ABCA3Q99758 TSSC2-201ENST00000450217 709 ntBASIC25.91■■□□□ 1.74
ABCA3Q99758 BX276092.5-203ENST00000456199 560 ntBASIC25.91■■□□□ 1.74
ABCA3Q99758 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
ABCA3Q99758 CALM1-205ENST00000553542 877 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 BMF-207ENST00000559701 630 ntTSL 3 BASIC25.91■■□□□ 1.74
ABCA3Q99758 AC104692.2-201ENST00000603054 253 ntBASIC25.91■■□□□ 1.74
ABCA3Q99758 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
ABCA3Q99758 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA3Q99758 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.91■■□□□ 1.74
ABCA3Q99758 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.91■■□□□ 1.74
ABCA3Q99758 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA3Q99758 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.9■■□□□ 1.74
ABCA3Q99758 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.9■■□□□ 1.74
ABCA3Q99758 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC25.9■■□□□ 1.74
ABCA3Q99758 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC25.9■■□□□ 1.74
ABCA3Q99758 AC012615.1-201ENST00000565797 1299 ntBASIC25.9■■□□□ 1.74
ABCA3Q99758 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
ABCA3Q99758 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA3Q99758 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA3Q99758 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA3Q99758 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.89■■□□□ 1.74
ABCA3Q99758 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA3Q99758 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.89■■□□□ 1.74
ABCA3Q99758 AP002414.4-201ENST00000589764 1148 ntBASIC25.89■■□□□ 1.74
ABCA3Q99758 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
ABCA3Q99758 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
ABCA3Q99758 SMG8-203ENST00000578922 2178 ntBASIC25.89■■□□□ 1.73
ABCA3Q99758 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA3Q99758 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA3Q99758 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.89■■□□□ 1.73
ABCA3Q99758 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA3Q99758 AC034232.1-201ENST00000506026 1064 ntBASIC25.88■■□□□ 1.73
ABCA3Q99758 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
ABCA3Q99758 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA3Q99758 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ABCA3Q99758 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA3Q99758 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA3Q99758 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA3Q99758 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
ABCA3Q99758 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.88■■□□□ 1.73
ABCA3Q99758 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA3Q99758 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.87■■□□□ 1.73
ABCA3Q99758 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA3Q99758 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.87■■□□□ 1.73
ABCA3Q99758 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC25.87■■□□□ 1.73
ABCA3Q99758 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC25.87■■□□□ 1.73
ABCA3Q99758 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA3Q99758 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
ABCA3Q99758 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.87■■□□□ 1.73
ABCA3Q99758 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC25.86■■□□□ 1.73
ABCA3Q99758 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ABCA3Q99758 AC006538.3-201ENST00000612495 578 ntBASIC25.86■■□□□ 1.73
ABCA3Q99758 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.86■■□□□ 1.73
ABCA3Q99758 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.86■■□□□ 1.73
ABCA3Q99758 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms