Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 AC012313.1-201ENST00000593393 3059 ntBASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 FP475955.4-201ENST00000623131 1990 ntBASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB3IPQ96QF0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 AL356740.2-201ENST00000601559 647 ntBASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 FAM21FP-204ENST00000608637 956 ntBASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IPQ96QF0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 MIR3621-201ENST00000580529 85 ntBASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3IPQ96QF0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 KRT16P2-201ENST00000414673 1423 ntBASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IPQ96QF0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IPQ96QF0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms