Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.95■■□□□ 1.26
NEK1Q96PY6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEK1Q96PY6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
NEK1Q96PY6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEK1Q96PY6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 AC133681.1-201ENST00000465482 601 ntBASIC22.94■■□□□ 1.26
NEK1Q96PY6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 C1QL1P1-201ENST00000568105 661 ntBASIC22.94■■□□□ 1.26
NEK1Q96PY6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEK1Q96PY6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.94■■□□□ 1.26
NEK1Q96PY6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
NEK1Q96PY6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NEK1Q96PY6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 FAM201B-201ENST00000458407 597 ntBASIC22.92■■□□□ 1.26
NEK1Q96PY6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 TEX21P-204ENST00000641479 1693 ntBASIC22.92■■□□□ 1.26
NEK1Q96PY6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.92■■□□□ 1.26
NEK1Q96PY6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 LINC01465-201ENST00000408887 1940 ntBASIC22.92■■□□□ 1.26
NEK1Q96PY6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NEK1Q96PY6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 KRT16P5-201ENST00000455284 522 ntBASIC22.91■■□□□ 1.26
NEK1Q96PY6 AC110285.5-201ENST00000611501 352 ntBASIC22.91■■□□□ 1.26
NEK1Q96PY6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NEK1Q96PY6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
NEK1Q96PY6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms