Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 AC010141.2-201ENST00000452426 721 ntBASIC14.62□□□□□ -0.07
AP1S3Q96PC3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 FAM21FP-204ENST00000608637 956 ntBASIC14.62□□□□□ -0.07
AP1S3Q96PC3 AL358852.1-201ENST00000623174 1268 ntBASIC14.62□□□□□ -0.07
AP1S3Q96PC3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AC125437.2-201ENST00000625180 2167 ntBASIC14.61□□□□□ -0.07
AP1S3Q96PC3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AL355001.2-201ENST00000620617 1191 ntBASIC14.61□□□□□ -0.07
AP1S3Q96PC3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S3Q96PC3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC007613.1-201ENST00000572811 2597 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 MIR939-201ENST00000401314 82 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC096631.2-201ENST00000436136 790 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AF213884.3-201ENST00000563833 479 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 AC106739.1-201ENST00000617035 715 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
AP1S3Q96PC3 BX119927.1-201ENST00000636596 1552 ntBASIC14.6□□□□□ -0.07
AP1S3Q96PC3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 KRT8P36-201ENST00000489121 1440 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms