Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 BX276092.5-203ENST00000456199 560 ntBASIC19.06■□□□□ 0.64
CFAP54Q96N23 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.05■□□□□ 0.64
CFAP54Q96N23 HLA-G-202ENST00000376815 851 ntBASIC19.05■□□□□ 0.64
CFAP54Q96N23 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.05■□□□□ 0.64
CFAP54Q96N23 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.05■□□□□ 0.64
CFAP54Q96N23 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 AC243591.1-201ENST00000452967 1364 ntBASIC19.05■□□□□ 0.64
CFAP54Q96N23 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CFAP54Q96N23 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.05■□□□□ 0.64
CFAP54Q96N23 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 TSSC2-201ENST00000450217 709 ntBASIC19.04■□□□□ 0.64
CFAP54Q96N23 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 PMS2P7-201ENST00000506558 1336 ntBASIC19.04■□□□□ 0.64
CFAP54Q96N23 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 AL691403.2-201ENST00000618460 490 ntBASIC19.04■□□□□ 0.64
CFAP54Q96N23 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 MIR940-201ENST00000401276 94 ntBASIC19.04■□□□□ 0.64
CFAP54Q96N23 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 TPSP2-201ENST00000561760 610 ntBASIC19.04■□□□□ 0.64
CFAP54Q96N23 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CFAP54Q96N23 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CFAP54Q96N23 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 AC026310.3-201ENST00000625186 2373 ntBASIC19.03■□□□□ 0.64
CFAP54Q96N23 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.03■□□□□ 0.64
CFAP54Q96N23 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CFAP54Q96N23 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 AP006587.1-201ENST00000534129 1502 ntBASIC19.02■□□□□ 0.64
CFAP54Q96N23 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CFAP54Q96N23 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 PGAM5P1-201ENST00000518923 814 ntBASIC19.02■□□□□ 0.64
CFAP54Q96N23 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CFAP54Q96N23 AC011484.1-201ENST00000377652 1995 ntBASIC19.02■□□□□ 0.64
CFAP54Q96N23 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CFAP54Q96N23 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CFAP54Q96N23 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CFAP54Q96N23 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CFAP54Q96N23 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.02■□□□□ 0.63
CFAP54Q96N23 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.02■□□□□ 0.63
CFAP54Q96N23 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.02■□□□□ 0.63
CFAP54Q96N23 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CFAP54Q96N23 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms