Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 AC005829.2-201ENST00000571422 1056 ntBASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPGRIP1Q96KN7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 AL355355.2-201ENST00000442321 338 ntBASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RPGRIP1Q96KN7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.33■■□□□ 1
RPGRIP1Q96KN7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 MIR2861-201ENST00000636310 90 ntBASIC21.32■■□□□ 1
RPGRIP1Q96KN7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPGRIP1Q96KN7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 AL390719.1-204ENST00000412397 1219 ntBASIC21.31■■□□□ 1
RPGRIP1Q96KN7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.31■■□□□ 1
RPGRIP1Q96KN7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 AC092865.7-201ENST00000641832 219 ntBASIC21.31■■□□□ 1
RPGRIP1Q96KN7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 AC093484.2-201ENST00000580996 2166 ntBASIC21.31■■□□□ 1
RPGRIP1Q96KN7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.31■■□□□ 1
RPGRIP1Q96KN7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms