Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VCPIP1Q96JH7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VCPIP1Q96JH7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.42■□□□□ 0.86
VCPIP1Q96JH7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.42■□□□□ 0.86
VCPIP1Q96JH7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 AC087289.5-201ENST00000586076 3175 ntBASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 AC004264.1-201ENST00000608354 794 ntBASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.41■□□□□ 0.86
VCPIP1Q96JH7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 TNXA-203ENST00000507684 2038 ntBASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VCPIP1Q96JH7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VCPIP1Q96JH7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VCPIP1Q96JH7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.39■□□□□ 0.86
VCPIP1Q96JH7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VCPIP1Q96JH7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.39■□□□□ 0.86
VCPIP1Q96JH7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 KRT18P29-201ENST00000397031 1267 ntBASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 ITM2C-210ENST00000620962 501 ntBASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VCPIP1Q96JH7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 C1QL1P1-201ENST00000568105 661 ntBASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 AL161938.1-201ENST00000569833 2180 ntBASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCPIP1Q96JH7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VCPIP1Q96JH7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms