Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 AL353708.3-201ENST00000610272 989 ntBASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3KBP1Q96B97 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 AC073912.3-201ENST00000624414 853 ntBASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH3KBP1Q96B97 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.17■□□□□ 0.66
SH3KBP1Q96B97 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 TFP1-202ENST00000475455 1573 ntBASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 AL355355.2-201ENST00000442321 338 ntBASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 CD177P1-201ENST00000606252 935 ntBASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 AC018553.1-201ENST00000616682 1458 ntBASIC19.16■□□□□ 0.66
SH3KBP1Q96B97 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SH3KBP1Q96B97 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms