Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.39■□□□□ 0.37
PTP4A1Q93096 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 MIR4758-201ENST00000577688 71 ntBASIC17.39■□□□□ 0.37
PTP4A1Q93096 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 GUSBP6-202ENST00000438529 1198 ntBASIC17.38■□□□□ 0.37
PTP4A1Q93096 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 AC005829.2-201ENST00000571422 1056 ntBASIC17.38■□□□□ 0.37
PTP4A1Q93096 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A1Q93096 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTP4A1Q93096 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 AC073210.2-201ENST00000430369 194 ntBASIC17.37■□□□□ 0.37
PTP4A1Q93096 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 AC092118.2-201ENST00000613495 667 ntBASIC17.37■□□□□ 0.37
PTP4A1Q93096 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A1Q93096 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PTP4A1Q93096 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms