Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 AC097658.1-201ENST00000475555 843 ntBASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB40AQ8WXH6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40AQ8WXH6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 KRT16P6-202ENST00000425692 1426 ntBASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40AQ8WXH6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 CYP2T3P-201ENST00000601990 817 ntBASIC17■□□□□ 0.31
RAB40AQ8WXH6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40AQ8WXH6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40AQ8WXH6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 AL355472.2-201ENST00000422958 438 ntBASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 AC091874.3-201ENST00000512672 1195 ntBASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40AQ8WXH6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms