Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00308Q8TCZ7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 FP475955.4-201ENST00000623131 1990 ntBASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00308Q8TCZ7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 AL358852.1-201ENST00000623174 1268 ntBASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00308Q8TCZ7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00308Q8TCZ7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00308Q8TCZ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00308Q8TCZ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00308Q8TCZ7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00308Q8TCZ7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 AC091799.1-201ENST00000422823 811 ntBASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00308Q8TCZ7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms