Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 AC004951.3-201ENST00000418645 1148 ntBASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 AC104076.2-201ENST00000448912 469 ntBASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHKBP1Q8TBC3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 KRT8P8-201ENST00000434750 1448 ntBASIC20.35■□□□□ 0.85
SHKBP1Q8TBC3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 AP005212.1-201ENST00000581547 1997 ntBASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 AC020907.5-201ENST00000624372 1936 ntBASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 DUX4L26-201ENST00000489078 1255 ntBASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 FAM87A-204ENST00000613235 858 ntBASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.34■□□□□ 0.85
SHKBP1Q8TBC3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 Z85996.1-201ENST00000494644 937 ntBASIC20.33■□□□□ 0.85
SHKBP1Q8TBC3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHKBP1Q8TBC3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 FAM207BP-201ENST00000447172 505 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms