Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 AL353708.3-201ENST00000610272 989 ntBASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 AC116562.4-201ENST00000641316 2276 ntBASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDND2Q8NHS1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 AL162377.1-201ENST00000618844 1793 ntBASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 AP006587.1-201ENST00000534129 1502 ntBASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDND2Q8NHS1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDND2Q8NHS1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDND2Q8NHS1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.46■□□□□ 0.22
CLDND2Q8NHS1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.46■□□□□ 0.22
CLDND2Q8NHS1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CLDND2Q8NHS1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms