Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 AC004980.1-204ENST00000429707 299 ntBASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 AL160286.2-201ENST00000567150 934 ntBASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 CR392000.1-201ENST00000624770 1228 ntBASIC20.58■□□□□ 0.89
SLC4A11Q8NBS3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SLC4A11Q8NBS3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 AC116562.4-201ENST00000641316 2276 ntBASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 KRT16P1-201ENST00000399124 1418 ntBASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 FAM197Y1-201ENST00000421178 764 ntBASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC4A11Q8NBS3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 CD177P1-201ENST00000606252 935 ntBASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC4A11Q8NBS3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 Z85996.1-201ENST00000494644 937 ntBASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC4A11Q8NBS3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms