Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 GCSHP5-201ENST00000443090 522 ntBASIC19.9■□□□□ 0.78
PAF1Q8N7H5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 AC110285.5-201ENST00000611501 352 ntBASIC19.9■□□□□ 0.78
PAF1Q8N7H5 AP006294.2-201ENST00000641667 209 ntBASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PAF1Q8N7H5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PAF1Q8N7H5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 AC124016.1-201ENST00000609552 612 ntBASIC19.89■□□□□ 0.77
PAF1Q8N7H5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAF1Q8N7H5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PAF1Q8N7H5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.87■□□□□ 0.77
PAF1Q8N7H5 UBE2SP1-201ENST00000450587 669 ntBASIC19.87■□□□□ 0.77
PAF1Q8N7H5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms