Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 AL049637.2-201ENST00000641778 930 ntBASIC20.62■□□□□ 0.89
TTC39CQ8N584 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC39CQ8N584 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC39CQ8N584 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC39CQ8N584 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC39CQ8N584 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC39CQ8N584 RPS2P4-201ENST00000476944 856 ntBASIC20.61■□□□□ 0.89
TTC39CQ8N584 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC39CQ8N584 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC39CQ8N584 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC39CQ8N584 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 AC004980.1-204ENST00000429707 299 ntBASIC20.6■□□□□ 0.89
TTC39CQ8N584 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
TTC39CQ8N584 CR392000.1-201ENST00000624770 1228 ntBASIC20.6■□□□□ 0.89
TTC39CQ8N584 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TTC39CQ8N584 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC39CQ8N584 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.59■□□□□ 0.89
TTC39CQ8N584 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 Z99916.2-201ENST00000604037 246 ntBASIC20.59■□□□□ 0.89
TTC39CQ8N584 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC39CQ8N584 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms