Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 ZNRF2P3-201ENST00000424200 374 ntBASIC13□□□□□ -0.33
LINC01561Q8N1V8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 AC011767.1-201ENST00000617410 1153 ntBASIC13□□□□□ -0.33
LINC01561Q8N1V8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 ANKRD18DP-204ENST00000455355 1975 ntBASIC13□□□□□ -0.33
LINC01561Q8N1V8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 AL031598.1-201ENST00000561511 1773 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 HCG11-201ENST00000411553 5696 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GPX1P1-201ENST00000388829 606 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 LSM12P1-201ENST00000411836 588 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 AC006015.1-201ENST00000429970 570 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 RAP2CP1-201ENST00000605103 478 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 MIR6821-201ENST00000617625 74 ntBASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01561Q8N1V8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 FP475955.4-201ENST00000623131 1990 ntBASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms