Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 AC073648.6-201ENST00000641589 218 ntBASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC116Q8IYX3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC116Q8IYX3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 AC128676.1-201ENST00000454392 318 ntBASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC116Q8IYX3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 KRASP1-201ENST00000407852 552 ntBASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms