Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC60Q8IWA6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC60Q8IWA6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
CCDC60Q8IWA6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC60Q8IWA6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC60Q8IWA6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC60Q8IWA6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC60Q8IWA6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CCDC60Q8IWA6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 AC125437.2-201ENST00000625180 2167 ntBASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 AC104417.2-201ENST00000562989 1793 ntBASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC60Q8IWA6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 C2orf69P3-201ENST00000565542 1120 ntBASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC60Q8IWA6 KRT18P22-201ENST00000402024 1347 ntBASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 TSPY14P-201ENST00000303979 915 ntBASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 INGX-201ENST00000359239 846 ntBASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 ZNF815P-204ENST00000434898 1737 ntBASIC21.55■■□□□ 1.04
CCDC60Q8IWA6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms