Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 TEX21P-204ENST00000641479 1693 ntBASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AC141586.3-201ENST00000562166 1838 ntBASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 POM121L13P-201ENST00000422362 380 ntBASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 UNC93B5-201ENST00000530315 699 ntBASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AC120498.9-201ENST00000339021 3867 ntBASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 AC104417.2-201ENST00000562989 1793 ntBASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL3Q8IVW4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL3Q8IVW4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 PRKY-204ENST00000533551 1019 ntBASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL3Q8IVW4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms