Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 AC138932.1-201ENST00000534164 6830 ntBASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.02■□□□□ 0.31
LYSMD2Q8IV50 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 AL512353.2-201ENST00000448759 1962 ntBASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 UNC93B3-201ENST00000308076 687 ntBASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 AL356441.2-201ENST00000443009 864 ntBASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 AC116050.2-201ENST00000612102 1779 ntBASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD2Q8IV50 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD2Q8IV50 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
LYSMD2Q8IV50 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 TSPY26P-201ENST00000476365 1326 ntBASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 AC141586.3-201ENST00000562166 1838 ntBASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms