Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.21■□□□□ 0.67
YTHDF3Q7Z739 AC126763.1-201ENST00000552015 2118 ntBASIC19.21■□□□□ 0.67
YTHDF3Q7Z739 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YTHDF3Q7Z739 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 IKBKGP1-201ENST00000612193 1073 ntBASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 TEX21P-204ENST00000641479 1693 ntBASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YTHDF3Q7Z739 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 AC022517.1-201ENST00000592429 346 ntBASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YTHDF3Q7Z739 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 PCDHA12-202ENST00000613593 2588 ntBASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YTHDF3Q7Z739 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YTHDF3Q7Z739 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms