Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3RF1Q7Z6J0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 AP001271.2-201ENST00000624018 1556 ntBASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH3RF1Q7Z6J0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 HLA-G-202ENST00000376815 851 ntBASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 HLA-G-203ENST00000376818 1127 ntBASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 AC010203.1-204ENST00000548782 407 ntBASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.22■■□□□ 1.15
SH3RF1Q7Z6J0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 AC116562.2-201ENST00000507042 360 ntBASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 AC093484.2-201ENST00000580996 2166 ntBASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3RF1Q7Z6J0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SH3RF1Q7Z6J0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
SH3RF1Q7Z6J0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
SH3RF1Q7Z6J0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 CR392000.1-201ENST00000624770 1228 ntBASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3RF1Q7Z6J0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 AC005332.7-201ENST00000614046 2005 ntBASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 AC006011.2-201ENST00000621313 1158 ntBASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3RF1Q7Z6J0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms