Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 NUS1P1-201ENST00000446295 882 ntBASIC16.38■□□□□ 0.21
CSMD2Q7Z408 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 AC079776.4-201ENST00000511039 504 ntBASIC16.38■□□□□ 0.21
CSMD2Q7Z408 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 CA15P1-201ENST00000481698 905 ntBASIC16.38■□□□□ 0.21
CSMD2Q7Z408 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.38■□□□□ 0.21
CSMD2Q7Z408 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 AL391422.3-201ENST00000603791 2761 ntBASIC16.37■□□□□ 0.21
CSMD2Q7Z408 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 TSSC2-201ENST00000450217 709 ntBASIC16.37■□□□□ 0.21
CSMD2Q7Z408 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 AF228730.7-201ENST00000641842 219 ntBASIC16.37■□□□□ 0.21
CSMD2Q7Z408 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD2Q7Z408 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 KRT16P4-201ENST00000453883 522 ntBASIC16.36■□□□□ 0.21
CSMD2Q7Z408 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 LINC00167-201ENST00000530583 1419 ntBASIC16.36■□□□□ 0.21
CSMD2Q7Z408 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD2Q7Z408 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 Z98882.1-201ENST00000622160 2253 ntBASIC16.35■□□□□ 0.21
CSMD2Q7Z408 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 MIR1233-2-201ENST00000408138 82 ntBASIC16.35■□□□□ 0.21
CSMD2Q7Z408 MIR1233-1-201ENST00000408722 82 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms