Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.444e-6■■□□□ 14
LARP4Q71RC2 FAH-209ENST00000559217 619 ntTSL 29.29□□□□□ -0.924e-6■■□□□ 14
LARP4Q71RC2 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.8□□□□□ -14e-6■■□□□ 14
LARP4Q71RC2 RPS9-210ENST00000460761 644 ntTSL 213.24□□□□□ -0.297e-15■■□□□ 14
LARP4Q71RC2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.647e-8■■□□□ 14
LARP4Q71RC2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.317e-8■■□□□ 14
LARP4Q71RC2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.16□□□□□ -0.37e-8■■□□□ 14
LARP4Q71RC2 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.29□□□□□ -0.447e-8■■□□□ 14
LARP4Q71RC2 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.517e-8■■□□□ 14
LARP4Q71RC2 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.697e-8■■□□□ 14
LARP4Q71RC2 HSPA8-215ENST00000532091 2301 ntTSL 510.56□□□□□ -0.727e-8■■□□□ 14
LARP4Q71RC2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.781e-7■■□□□ 14
LARP4Q71RC2 RPS24-209ENST00000476545 815 ntTSL 311.86□□□□□ -0.518e-61■■□□□ 14
LARP4Q71RC2 PRDX4-204ENST00000439422 554 ntTSL 35.88□□□□□ -1.471e-7■■□□□ 14
LARP4Q71RC2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.538e-61■■□□□ 14
LARP4Q71RC2 AES-211ENST00000592330 275 ntTSL 54.52□□□□□ -1.694e-8■■□□□ 14
LARP4Q71RC2 ATP5O-209ENST00000495005 586 ntTSL 29.24□□□□□ -0.933e-6■■□□□ 14
LARP4Q71RC2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.883e-7■■□□□ 14
LARP4Q71RC2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.7■□□□□ 0.743e-7■■□□□ 14
LARP4Q71RC2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.662e-7■■□□□ 14
LARP4Q71RC2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.7■□□□□ 0.582e-7■■□□□ 14
LARP4Q71RC2 CTSD-203ENST00000429746 690 ntTSL 316.04■□□□□ 0.162e-20■■□□□ 14
LARP4Q71RC2 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.341e-7■■□□□ 14
LARP4Q71RC2 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.531e-7■■□□□ 14
LARP4Q71RC2 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC11.63□□□□□ -0.551e-7■■□□□ 14
LARP4Q71RC2 MAGED1-209ENST00000485420 2906 ntTSL 511.56□□□□□ -0.561e-7■■□□□ 14
LARP4Q71RC2 MAGED1-210ENST00000494718 5418 ntTSL 210.11□□□□□ -0.791e-7■■□□□ 14
LARP4Q71RC2 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.851e-7■■□□□ 14
LARP4Q71RC2 MAGED1-206ENST00000473931 950 ntTSL 27.73□□□□□ -1.171e-7■■□□□ 14
LARP4Q71RC2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.67e-10■■□□□ 14
LARP4Q71RC2 PGAM1-202ENST00000467867 1187 ntTSL 211.15□□□□□ -0.627e-10■■□□□ 14
LARP4Q71RC2 LAMTOR5-202ENST00000464240 1830 ntTSL 217.95■□□□□ 0.461e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.69■□□□□ 0.11e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.69■□□□□ 0.11e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.1■□□□□ 0.011e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC12.64□□□□□ -0.391e-7■■□□□ 14
LARP4Q71RC2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.73□□□□□ -1.331e-7■■□□□ 14
LARP4Q71RC2 TMEM59L-204ENST00000598660 1683 ntTSL 520.78■□□□□ 0.924e-7■■□□□ 14
LARP4Q71RC2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.444e-7■■□□□ 14
LARP4Q71RC2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.354e-7■■□□□ 14
LARP4Q71RC2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.176e-7■■□□□ 14
LARP4Q71RC2 SGSH-210ENST00000573150 2612 ntTSL 213.82□□□□□ -0.26e-7■■□□□ 14
LARP4Q71RC2 SGSH-213ENST00000575282 5562 ntTSL 1 (best)13.46□□□□□ -0.266e-7■■□□□ 14
LARP4Q71RC2 SGSH-214ENST00000575484 565 ntTSL 311.37□□□□□ -0.596e-7■■□□□ 14
LARP4Q71RC2 SGSH-209ENST00000572257 581 ntTSL 410.09□□□□□ -0.796e-7■■□□□ 14
LARP4Q71RC2 SGSH-206ENST00000571156 554 ntTSL 410□□□□□ -0.816e-7■■□□□ 14
LARP4Q71RC2 SLC19A1-206ENST00000460174 600 ntTSL 313□□□□□ -0.333e-6■■□□□ 14
LARP4Q71RC2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.232e-8■■□□□ 14
LARP4Q71RC2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.182e-8■■□□□ 14
LARP4Q71RC2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.312e-8■■□□□ 14
LARP4Q71RC2 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.642e-8■■□□□ 14
LARP4Q71RC2 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.652e-8■■□□□ 14
LARP4Q71RC2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.44□□□□□ -1.382e-8■■□□□ 14
LARP4Q71RC2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.59□□□□□ -1.512e-8■■□□□ 14
LARP4Q71RC2 RPL35A-203ENST00000439255 564 ntTSL 56.29□□□□□ -1.45e-9■■□□□ 14
LARP4Q71RC2 RTKN-211ENST00000640304 612 ntTSL 514.77□□□□□ -0.058e-9■■□□□ 14
LARP4Q71RC2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 02e-7■■□□□ 14
LARP4Q71RC2 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.452e-7■■□□□ 14
LARP4Q71RC2 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.582e-7■■□□□ 14
LARP4Q71RC2 HYPK-204ENST00000497142 428 ntTSL 211.25□□□□□ -0.612e-7■■□□□ 14
LARP4Q71RC2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.972e-7■■□□□ 14
LARP4Q71RC2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.151e-6■■□□□ 13.9
LARP4Q71RC2 PRPF31-207ENST00000466404 1837 ntTSL 218.34■□□□□ 0.531e-9■■□□□ 13.9
LARP4Q71RC2 C9orf16-203ENST00000489240 573 ntTSL 317.41■□□□□ 0.381e-9■■□□□ 13.9
LARP4Q71RC2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.37■□□□□ 0.371e-9■■□□□ 13.9
LARP4Q71RC2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.09■□□□□ 0.331e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.58■□□□□ 0.251e-9■■□□□ 13.9
LARP4Q71RC2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.211e-9■■□□□ 13.9
LARP4Q71RC2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.034e-10■■□□□ 13.9
LARP4Q71RC2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.74□□□□□ -0.051e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-210ENST00000413197 2442 ntTSL 213.85□□□□□ -0.191e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.74□□□□□ -0.211e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.221e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-221ENST00000488111 2381 ntTSL 1 (best)13.34□□□□□ -0.271e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.21□□□□□ -0.291e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-217ENST00000461350 3299 ntTSL 211.05□□□□□ -0.641e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-209ENST00000412922 1935 ntTSL 510.99□□□□□ -0.651e-9■■□□□ 13.9
LARP4Q71RC2 COPS7B-213ENST00000449174 668 ntTSL 310.53□□□□□ -0.721e-9■■□□□ 13.9
LARP4Q71RC2 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.971e-9■■□□□ 13.9
LARP4Q71RC2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.55■□□□□ 0.087e-8■■□□□ 13.9
LARP4Q71RC2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.03■■□□□ 1.761e-7■■□□□ 13.9
LARP4Q71RC2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.161e-7■■□□□ 13.9
LARP4Q71RC2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.661e-7■■□□□ 13.9
LARP4Q71RC2 POLE4-201ENST00000233699 602 ntTSL 310.08□□□□□ -0.81e-7■■□□□ 13.9
LARP4Q71RC2 POLE4-203ENST00000465242 528 ntTSL 23.61□□□□□ -1.831e-7■■□□□ 13.9
LARP4Q71RC2 RPL13-211ENST00000563270 554 ntTSL 414.19□□□□□ -0.142e-87■■□□□ 13.9
LARP4Q71RC2 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC10.48□□□□□ -0.732e-7■■□□□ 13.9
LARP4Q71RC2 AC011481.3-201ENST00000623895 5594 ntBASIC12.81□□□□□ -0.362e-10■■□□□ 13.9
LARP4Q71RC2 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-10■■□□□ 13.9
LARP4Q71RC2 PCSK9-202ENST00000490692 3891 ntTSL 211.3□□□□□ -0.62e-10■■□□□ 13.9
LARP4Q71RC2 SLC2A4RG-208ENST00000496425 502 ntTSL 215.62■□□□□ 0.094e-9■■□□□ 13.9
LARP4Q71RC2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.185e-73■■□□□ 13.9
LARP4Q71RC2 SRSF9-205ENST00000550458 327 ntTSL 310.99□□□□□ -0.651e-7■■□□□ 13.9
LARP4Q71RC2 TXN2-205ENST00000487725 736 ntTSL 317.3■□□□□ 0.362e-9■■□□□ 13.9
LARP4Q71RC2 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.622e-9■■□□□ 13.9
LARP4Q71RC2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.97■□□□□ 0.156e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-203ENST00000420199 1002 ntTSL 313.85□□□□□ -0.196e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-215ENST00000623163 851 ntTSL 512.94□□□□□ -0.346e-8■■□□□ 13.9
Retrieved 100 of 15,922 protein–RNA pairs in 81.6 ms