Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RARRES2P10-201ENST00000564312 460 ntBASIC18.16■□□□□ 0.5
RTL4Q6ZR62 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 AC116351.2-201ENST00000606540 1585 ntBASIC18.16■□□□□ 0.5
RTL4Q6ZR62 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 Z99916.2-201ENST00000604037 246 ntBASIC18.15■□□□□ 0.5
RTL4Q6ZR62 AP001412.1-201ENST00000608405 714 ntBASIC18.15■□□□□ 0.5
RTL4Q6ZR62 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 PHGDH-210ENST00000641115 1638 ntBASIC18.15■□□□□ 0.5
RTL4Q6ZR62 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 AC087289.5-201ENST00000586076 3175 ntBASIC18.15■□□□□ 0.5
RTL4Q6ZR62 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL4Q6ZR62 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RTL4Q6ZR62 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTL4Q6ZR62 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTL4Q6ZR62 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTL4Q6ZR62 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RTL4Q6ZR62 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 RPS2P55-201ENST00000397318 883 ntBASIC18.14■□□□□ 0.49
RTL4Q6ZR62 AC107956.1-201ENST00000494359 873 ntBASIC18.14■□□□□ 0.49
RTL4Q6ZR62 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 AC125437.2-201ENST00000625180 2167 ntBASIC18.14■□□□□ 0.49
RTL4Q6ZR62 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTL4Q6ZR62 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 AC233702.5-201ENST00000584107 538 ntBASIC18.13■□□□□ 0.49
RTL4Q6ZR62 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL4Q6ZR62 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms