Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 AL020996.1-203ENST00000536896 2307 ntBASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 KRT17P3-201ENST00000420566 1262 ntBASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 TSPY21P-201ENST00000433481 731 ntBASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 AC004264.1-201ENST00000608354 794 ntBASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 HLA-A-209ENST00000638375 975 ntBASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXR2Q6PJQ5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 AL049812.1-201ENST00000432563 2267 ntBASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXR2Q6PJQ5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXR2Q6PJQ5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 AL160286.2-201ENST00000567150 934 ntBASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXR2Q6PJQ5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 AC133681.1-201ENST00000465482 601 ntBASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXR2Q6PJQ5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXR2Q6PJQ5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms