Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 GPX1P1-201ENST00000388829 606 ntBASIC16.84■□□□□ 0.29
C11orf88Q6PI97 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MFSD11-216ENST00000590393 1141 ntBASIC16.84■□□□□ 0.29
C11orf88Q6PI97 AP001160.3-201ENST00000601484 763 ntBASIC16.84■□□□□ 0.29
C11orf88Q6PI97 AC104771.1-201ENST00000603335 964 ntBASIC16.84■□□□□ 0.29
C11orf88Q6PI97 AL109923.1-201ENST00000618799 583 ntBASIC16.84■□□□□ 0.29
C11orf88Q6PI97 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C11orf88Q6PI97 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
C11orf88Q6PI97 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
C11orf88Q6PI97 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C11orf88Q6PI97 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 MIR663A-201ENST00000385250 93 ntBASIC16.83■□□□□ 0.28
C11orf88Q6PI97 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 AC007322.1-201ENST00000426983 750 ntBASIC16.83■□□□□ 0.28
C11orf88Q6PI97 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 CROCCP5-201ENST00000436658 830 ntBASIC16.83■□□□□ 0.28
C11orf88Q6PI97 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C11orf88Q6PI97 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 AC010141.2-201ENST00000452426 721 ntBASIC16.82■□□□□ 0.28
C11orf88Q6PI97 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 MYCNOS-205ENST00000641950 531 ntBASIC16.82■□□□□ 0.28
C11orf88Q6PI97 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms