Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 NIFKP9-201ENST00000419265 221 ntBASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 UBE2SP1-201ENST00000450587 669 ntBASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
PRICKLE4Q2TBC4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 AL353807.1-201ENST00000427475 662 ntBASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRICKLE4Q2TBC4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 AL160286.2-201ENST00000567150 934 ntBASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 AL445675.2-201ENST00000620291 557 ntBASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRICKLE4Q2TBC4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 AP002982.1-201ENST00000492365 877 ntBASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 AF186192.3-201ENST00000583427 947 ntBASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRICKLE4Q2TBC4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms