Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDS5AQ29RF7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.27■■□□□ 1.32
PDS5AQ29RF7 AL138966.2-201ENST00000621997 464 ntBASIC23.27■■□□□ 1.32
PDS5AQ29RF7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PDS5AQ29RF7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.27■■□□□ 1.31
PDS5AQ29RF7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
PDS5AQ29RF7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 AC006011.2-201ENST00000621313 1158 ntBASIC23.25■■□□□ 1.31
PDS5AQ29RF7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PDS5AQ29RF7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 TSPY21P-201ENST00000433481 731 ntBASIC23.24■■□□□ 1.31
PDS5AQ29RF7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms