Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FITM1-202ENST00000559294 800 ntBASIC20.4■□□□□ 0.86
USP46P62068 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
USP46P62068 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.4■□□□□ 0.86
USP46P62068 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.4■□□□□ 0.86
USP46P62068 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.39■□□□□ 0.86
USP46P62068 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP46P62068 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP46P62068 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP46P62068 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.39■□□□□ 0.86
USP46P62068 PCDHAC2-203ENST00000615316 3011 ntBASIC20.39■□□□□ 0.85
USP46P62068 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.39■□□□□ 0.85
USP46P62068 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.39■□□□□ 0.85
USP46P62068 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 Z85996.1-201ENST00000494644 937 ntBASIC20.39■□□□□ 0.85
USP46P62068 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
USP46P62068 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.39■□□□□ 0.85
USP46P62068 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP46P62068 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
USP46P62068 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.38■□□□□ 0.85
USP46P62068 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.38■□□□□ 0.85
USP46P62068 AC130371.2-201ENST00000619443 611 ntBASIC20.38■□□□□ 0.85
USP46P62068 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.38■□□□□ 0.85
USP46P62068 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP46P62068 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP46P62068 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.37■□□□□ 0.85
USP46P62068 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.37■□□□□ 0.85
USP46P62068 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.37■□□□□ 0.85
USP46P62068 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.37■□□□□ 0.85
USP46P62068 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.37■□□□□ 0.85
USP46P62068 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
USP46P62068 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP46P62068 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.37■□□□□ 0.85
USP46P62068 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.37■□□□□ 0.85
USP46P62068 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USP46P62068 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.36■□□□□ 0.85
USP46P62068 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
USP46P62068 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
USP46P62068 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.36■□□□□ 0.85
USP46P62068 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.36■□□□□ 0.85
USP46P62068 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.36■□□□□ 0.85
USP46P62068 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.36■□□□□ 0.85
USP46P62068 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.36■□□□□ 0.85
USP46P62068 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.36■□□□□ 0.85
USP46P62068 AC011298.2-201ENST00000617989 482 ntBASIC20.36■□□□□ 0.85
USP46P62068 AC010947.1-201ENST00000623454 693 ntBASIC20.36■□□□□ 0.85
USP46P62068 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.36■□□□□ 0.85
USP46P62068 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.36■□□□□ 0.85
USP46P62068 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP46P62068 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms