Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ACTBP60709 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ACTBP60709 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.66■□□□□ 0.26
ACTBP60709 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.66■□□□□ 0.26
ACTBP60709 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.66■□□□□ 0.26
ACTBP60709 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ACTBP60709 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ACTBP60709 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ACTBP60709 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 KRT8P20-201ENST00000423953 1409 ntBASIC16.65■□□□□ 0.26
ACTBP60709 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.65■□□□□ 0.26
ACTBP60709 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.65■□□□□ 0.26
ACTBP60709 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ACTBP60709 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.65■□□□□ 0.26
ACTBP60709 AC137761.2-201ENST00000561729 223 ntBASIC16.65■□□□□ 0.26
ACTBP60709 SLC7A5P1-201ENST00000568957 537 ntBASIC16.65■□□□□ 0.26
ACTBP60709 AC145350.3-201ENST00000569033 163 ntBASIC16.65■□□□□ 0.26
ACTBP60709 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.65■□□□□ 0.26
ACTBP60709 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.65■□□□□ 0.26
ACTBP60709 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.65■□□□□ 0.26
ACTBP60709 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.65■□□□□ 0.26
ACTBP60709 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
ACTBP60709 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 OR6D1P-202ENST00000641007 5290 ntBASIC16.65■□□□□ 0.26
ACTBP60709 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 AC006333.2-201ENST00000607957 2099 ntBASIC16.65■□□□□ 0.26
ACTBP60709 AC104581.1-202ENST00000635932 2618 ntBASIC16.65■□□□□ 0.26
ACTBP60709 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ACTBP60709 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
ACTBP60709 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
ACTBP60709 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.64■□□□□ 0.25
ACTBP60709 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.64■□□□□ 0.25
ACTBP60709 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.64■□□□□ 0.25
ACTBP60709 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.64■□□□□ 0.25
ACTBP60709 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
ACTBP60709 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.64■□□□□ 0.25
ACTBP60709 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 MYCNOS-205ENST00000641950 531 ntBASIC16.64■□□□□ 0.25
ACTBP60709 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.64■□□□□ 0.25
ACTBP60709 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ACTBP60709 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 AC090164.3-201ENST00000610780 2143 ntBASIC16.64■□□□□ 0.25
ACTBP60709 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ACTBP60709 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.64■□□□□ 0.25
ACTBP60709 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACTBP60709 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ACTBP60709 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ACTBP60709 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ACTBP60709 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 KRT18P11-201ENST00000435214 1283 ntBASIC16.63■□□□□ 0.25
ACTBP60709 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.63■□□□□ 0.25
ACTBP60709 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ACTBP60709 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACTBP60709 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms