Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
CASP6P55212 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP6P55212 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CASP6P55212 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP6P55212 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.41■□□□□ 0.38
CASP6P55212 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.41■□□□□ 0.38
CASP6P55212 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.41■□□□□ 0.38
CASP6P55212 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
CASP6P55212 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP6P55212 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 AC096733.2-201ENST00000609937 1394 ntBASIC17.4■□□□□ 0.38
CASP6P55212 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CASP6P55212 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CASP6P55212 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CASP6P55212 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP6P55212 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASP6P55212 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP6P55212 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.4■□□□□ 0.38
CASP6P55212 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP6P55212 TSPY17P-201ENST00000450329 467 ntBASIC17.4■□□□□ 0.38
CASP6P55212 COX11P1-201ENST00000489116 835 ntBASIC17.4■□□□□ 0.38
CASP6P55212 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.4■□□□□ 0.38
CASP6P55212 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.4■□□□□ 0.38
CASP6P55212 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.4■□□□□ 0.38
CASP6P55212 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CASP6P55212 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.4■□□□□ 0.38
CASP6P55212 HLA-A-209ENST00000638375 975 ntBASIC17.4■□□□□ 0.38
CASP6P55212 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 AC007225.1-201ENST00000566331 1836 ntBASIC17.4■□□□□ 0.38
CASP6P55212 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CASP6P55212 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP6P55212 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
CASP6P55212 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CASP6P55212 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CASP6P55212 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CASP6P55212 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CASP6P55212 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.39■□□□□ 0.37
CASP6P55212 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP6P55212 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.39■□□□□ 0.37
CASP6P55212 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP6P55212 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CASP6P55212 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.39■□□□□ 0.37
CASP6P55212 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP6P55212 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP6P55212 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP6P55212 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
CASP6P55212 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP6P55212 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP6P55212 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.38■□□□□ 0.37
CASP6P55212 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP6P55212 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CASP6P55212 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
CASP6P55212 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP6P55212 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CASP6P55212 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CASP6P55212 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.38■□□□□ 0.37
CASP6P55212 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.38■□□□□ 0.37
CASP6P55212 AC117947.1-201ENST00000427448 529 ntBASIC17.38■□□□□ 0.37
CASP6P55212 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.38■□□□□ 0.37
CASP6P55212 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.38■□□□□ 0.37
CASP6P55212 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
CASP6P55212 AC139887.4-201ENST00000607877 719 ntBASIC17.38■□□□□ 0.37
CASP6P55212 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms