Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ECEL1P2-202ENST00000465689 757 ntBASIC18.83■□□□□ 0.6
PDX1P52945 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
PDX1P52945 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 EGLN1P1-201ENST00000531623 762 ntBASIC18.83■□□□□ 0.6
PDX1P52945 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 WWOX-216ENST00000569818 525 ntBASIC18.83■□□□□ 0.6
PDX1P52945 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDX1P52945 FAM87A-204ENST00000613235 858 ntBASIC18.83■□□□□ 0.6
PDX1P52945 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.83■□□□□ 0.6
PDX1P52945 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDX1P52945 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDX1P52945 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.82■□□□□ 0.6
PDX1P52945 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.82■□□□□ 0.6
PDX1P52945 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDX1P52945 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
PDX1P52945 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDX1P52945 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.82■□□□□ 0.6
PDX1P52945 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PDX1P52945 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.82■□□□□ 0.6
PDX1P52945 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.82■□□□□ 0.6
PDX1P52945 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDX1P52945 KRT16P6-202ENST00000425692 1426 ntBASIC18.82■□□□□ 0.6
PDX1P52945 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDX1P52945 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.81■□□□□ 0.6
PDX1P52945 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 TUBB8P6-201ENST00000436895 1288 ntBASIC18.81■□□□□ 0.6
PDX1P52945 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 AC097488.1-201ENST00000507834 756 ntBASIC18.81■□□□□ 0.6
PDX1P52945 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.81■□□□□ 0.6
PDX1P52945 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.81■□□□□ 0.6
PDX1P52945 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDX1P52945 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDX1P52945 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDX1P52945 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
PDX1P52945 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDX1P52945 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 CRYGFP-201ENST00000418459 633 ntBASIC18.8■□□□□ 0.6
PDX1P52945 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
PDX1P52945 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.8■□□□□ 0.6
PDX1P52945 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PDX1P52945 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.8■□□□□ 0.6
PDX1P52945 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDX1P52945 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDX1P52945 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
PDX1P52945 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms