Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.95■■□□□ 1.1
USP11P51784 AP003071.4-201ENST00000562276 1284 ntBASIC21.95■■□□□ 1.1
USP11P51784 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 AC130371.2-201ENST00000619443 611 ntBASIC21.95■■□□□ 1.1
USP11P51784 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
USP11P51784 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP11P51784 FSCN1P1-201ENST00000568912 1481 ntBASIC21.95■■□□□ 1.1
USP11P51784 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.94■■□□□ 1.1
USP11P51784 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 MESTP1-201ENST00000404287 994 ntBASIC21.94■■□□□ 1.1
USP11P51784 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.94■■□□□ 1.1
USP11P51784 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.94■■□□□ 1.1
USP11P51784 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.94■■□□□ 1.1
USP11P51784 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
USP11P51784 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.94■■□□□ 1.1
USP11P51784 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP11P51784 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP11P51784 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
USP11P51784 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
USP11P51784 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 AC011506.1-201ENST00000474329 610 ntBASIC21.93■■□□□ 1.1
USP11P51784 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.93■■□□□ 1.1
USP11P51784 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
USP11P51784 REXO1L10P-201ENST00000615707 1290 ntBASIC21.93■■□□□ 1.1
USP11P51784 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP11P51784 MIR6786-201ENST00000616843 113 ntBASIC21.93■■□□□ 1.1
USP11P51784 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
USP11P51784 REXO1L12P-201ENST00000622156 912 ntBASIC21.93■■□□□ 1.1
USP11P51784 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.93■■□□□ 1.1
USP11P51784 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.92■■□□□ 1.1
USP11P51784 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 RCC2P6-201ENST00000526625 1557 ntBASIC21.92■■□□□ 1.1
USP11P51784 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP11P51784 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.92■■□□□ 1.1
USP11P51784 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
USP11P51784 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
USP11P51784 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 B3GAT3P1-201ENST00000471720 806 ntBASIC21.92■■□□□ 1.1
USP11P51784 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.92■■□□□ 1.1
USP11P51784 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.92■■□□□ 1.1
USP11P51784 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.92■■□□□ 1.1
USP11P51784 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP11P51784 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.92■■□□□ 1.1
USP11P51784 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.92■■□□□ 1.1
USP11P51784 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP11P51784 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
USP11P51784 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 KRT8P41-201ENST00000533985 1514 ntBASIC21.91■■□□□ 1.1
USP11P51784 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.91■■□□□ 1.1
USP11P51784 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
USP11P51784 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 AC004951.3-201ENST00000418645 1148 ntBASIC21.91■■□□□ 1.1
USP11P51784 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.91■■□□□ 1.1
USP11P51784 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.91■■□□□ 1.1
USP11P51784 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms