Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.03■□□□□ 0.32
CX3CR1P49238 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.03■□□□□ 0.32
CX3CR1P49238 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.03■□□□□ 0.32
CX3CR1P49238 AC083880.1-201ENST00000608266 535 ntBASIC17.03■□□□□ 0.32
CX3CR1P49238 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.03■□□□□ 0.32
CX3CR1P49238 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CX3CR1P49238 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.02■□□□□ 0.32
CX3CR1P49238 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CX3CR1P49238 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.02■□□□□ 0.32
CX3CR1P49238 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.02■□□□□ 0.32
CX3CR1P49238 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.02■□□□□ 0.32
CX3CR1P49238 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.02■□□□□ 0.32
CX3CR1P49238 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.02■□□□□ 0.32
CX3CR1P49238 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.02■□□□□ 0.32
CX3CR1P49238 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CX3CR1P49238 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.02■□□□□ 0.32
CX3CR1P49238 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CX3CR1P49238 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.02■□□□□ 0.32
CX3CR1P49238 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CR1P49238 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.02■□□□□ 0.31
CX3CR1P49238 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.02■□□□□ 0.31
CX3CR1P49238 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.02■□□□□ 0.31
CX3CR1P49238 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CR1P49238 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.01■□□□□ 0.31
CX3CR1P49238 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.01■□□□□ 0.31
CX3CR1P49238 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.01■□□□□ 0.31
CX3CR1P49238 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 AC069152.1-201ENST00000438030 544 ntBASIC17.01■□□□□ 0.31
CX3CR1P49238 AC133041.1-202ENST00000642053 222 ntBASIC17.01■□□□□ 0.31
CX3CR1P49238 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.01■□□□□ 0.31
CX3CR1P49238 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CX3CR1P49238 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.01■□□□□ 0.31
CX3CR1P49238 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CX3CR1P49238 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CR1P49238 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CX3CR1P49238 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CX3CR1P49238 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17■□□□□ 0.31
CX3CR1P49238 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CX3CR1P49238 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17■□□□□ 0.31
CX3CR1P49238 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17■□□□□ 0.31
CX3CR1P49238 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17■□□□□ 0.31
CX3CR1P49238 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17■□□□□ 0.31
CX3CR1P49238 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17■□□□□ 0.31
CX3CR1P49238 AC090192.1-201ENST00000517740 490 ntBASIC17■□□□□ 0.31
CX3CR1P49238 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17■□□□□ 0.31
CX3CR1P49238 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17■□□□□ 0.31
CX3CR1P49238 SOX15-203ENST00000570788 1093 ntBASIC17■□□□□ 0.31
CX3CR1P49238 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CX3CR1P49238 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CX3CR1P49238 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17■□□□□ 0.31
CX3CR1P49238 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17■□□□□ 0.31
CX3CR1P49238 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CX3CR1P49238 AP006587.1-201ENST00000534129 1502 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms