Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 IL11-204ENST00000590625 1028 ntTSL 2 BASIC34.4■■■■□ 3.1
NCAPD3P42695 BX640515.1-201ENST00000617215 977 ntBASIC34.4■■■■□ 3.1
NCAPD3P42695 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
NCAPD3P42695 AC079602.3-201ENST00000623931 403 ntBASIC34.4■■■■□ 3.1
NCAPD3P42695 VPS51-217ENST00000639871 243 ntTSL 5 BASIC34.4■■■■□ 3.1
NCAPD3P42695 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
NCAPD3P42695 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC34.4■■■■□ 3.1
NCAPD3P42695 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC34.4■■■■□ 3.1
NCAPD3P42695 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
NCAPD3P42695 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
NCAPD3P42695 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
NCAPD3P42695 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
NCAPD3P42695 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC34.39■■■■□ 3.1
NCAPD3P42695 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC34.39■■■■□ 3.1
NCAPD3P42695 AL121772.3-201ENST00000610840 674 ntBASIC34.39■■■■□ 3.1
NCAPD3P42695 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC34.39■■■■□ 3.1
NCAPD3P42695 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC34.39■■■■□ 3.1
NCAPD3P42695 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 AL117328.2-201ENST00000624617 1940 ntBASIC34.39■■■■□ 3.1
NCAPD3P42695 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
NCAPD3P42695 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
NCAPD3P42695 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
NCAPD3P42695 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
NCAPD3P42695 LSR-203ENST00000360798 1963 ntTSL 2 BASIC34.38■■■■□ 3.09
NCAPD3P42695 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC34.38■■■■□ 3.09
NCAPD3P42695 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NCAPD3P42695 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NCAPD3P42695 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NCAPD3P42695 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
NCAPD3P42695 CALM3-211ENST00000598871 561 ntTSL 4 BASIC34.38■■■■□ 3.09
NCAPD3P42695 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NCAPD3P42695 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC34.37■■■■□ 3.09
NCAPD3P42695 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
NCAPD3P42695 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
NCAPD3P42695 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC34.37■■■■□ 3.09
NCAPD3P42695 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC34.37■■■■□ 3.09
NCAPD3P42695 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
NCAPD3P42695 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
NCAPD3P42695 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
NCAPD3P42695 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
NCAPD3P42695 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.36■■■■□ 3.09
NCAPD3P42695 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
NCAPD3P42695 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC34.36■■■■□ 3.09
NCAPD3P42695 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC34.36■■■■□ 3.09
NCAPD3P42695 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC34.36■■■■□ 3.09
NCAPD3P42695 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC34.36■■■■□ 3.09
NCAPD3P42695 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
NCAPD3P42695 AC091304.2-201ENST00000564639 760 ntBASIC34.36■■■■□ 3.09
NCAPD3P42695 AL121912.1-201ENST00000603683 238 ntBASIC34.36■■■■□ 3.09
NCAPD3P42695 AC117500.6-201ENST00000624871 588 ntBASIC34.36■■■■□ 3.09
NCAPD3P42695 FP700111.2-201ENST00000619190 1892 ntBASIC34.36■■■■□ 3.09
NCAPD3P42695 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC34.35■■■■□ 3.09
NCAPD3P42695 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC34.35■■■■□ 3.09
NCAPD3P42695 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC34.35■■■■□ 3.09
NCAPD3P42695 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
NCAPD3P42695 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
NCAPD3P42695 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
NCAPD3P42695 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
NCAPD3P42695 AC120114.3-201ENST00000611923 658 ntBASIC34.34■■■■□ 3.09
NCAPD3P42695 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC34.34■■■■□ 3.09
NCAPD3P42695 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC34.34■■■■□ 3.09
NCAPD3P42695 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC34.34■■■■□ 3.09
NCAPD3P42695 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC34.33■■■■□ 3.09
NCAPD3P42695 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC34.33■■■■□ 3.09
NCAPD3P42695 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC34.33■■■■□ 3.09
NCAPD3P42695 RNA5SP419-201ENST00000515908 135 ntBASIC34.33■■■■□ 3.09
NCAPD3P42695 AC233723.2-201ENST00000623798 2106 ntBASIC34.33■■■■□ 3.09
NCAPD3P42695 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC34.33■■■■□ 3.09
NCAPD3P42695 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC34.33■■■■□ 3.09
NCAPD3P42695 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC34.33■■■■□ 3.09
NCAPD3P42695 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC34.33■■■■□ 3.09
NCAPD3P42695 MIR662-201ENST00000384847 95 ntBASIC34.33■■■■□ 3.09
NCAPD3P42695 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
NCAPD3P42695 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms