Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC020763.4-201ENST00000623414 4170 ntBASIC21.07■□□□□ 0.96
USP8P40818 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP8P40818 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.07■□□□□ 0.96
USP8P40818 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.07■□□□□ 0.96
USP8P40818 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP8P40818 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.07■□□□□ 0.96
USP8P40818 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.07■□□□□ 0.96
USP8P40818 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
USP8P40818 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
USP8P40818 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP8P40818 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP8P40818 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.07■□□□□ 0.96
USP8P40818 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP8P40818 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.07■□□□□ 0.96
USP8P40818 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.06■□□□□ 0.96
USP8P40818 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 AC093484.2-201ENST00000580996 2166 ntBASIC21.06■□□□□ 0.96
USP8P40818 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.06■□□□□ 0.96
USP8P40818 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.06■□□□□ 0.96
USP8P40818 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP8P40818 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
USP8P40818 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP8P40818 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
USP8P40818 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.06■□□□□ 0.96
USP8P40818 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP8P40818 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.05■□□□□ 0.96
USP8P40818 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.05■□□□□ 0.96
USP8P40818 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.05■□□□□ 0.96
USP8P40818 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
USP8P40818 RNA5SP413-201ENST00000516373 109 ntBASIC21.05■□□□□ 0.96
USP8P40818 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP8P40818 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.05■□□□□ 0.96
USP8P40818 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.05■□□□□ 0.96
USP8P40818 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.05■□□□□ 0.96
USP8P40818 AC120498.8-201ENST00000614275 531 ntBASIC21.05■□□□□ 0.96
USP8P40818 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.05■□□□□ 0.96
USP8P40818 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
USP8P40818 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
USP8P40818 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP8P40818 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP8P40818 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.04■□□□□ 0.96
USP8P40818 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP8P40818 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.04■□□□□ 0.96
USP8P40818 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.04■□□□□ 0.96
USP8P40818 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.04■□□□□ 0.96
USP8P40818 AC008687.6-201ENST00000596318 630 ntBASIC21.04■□□□□ 0.96
USP8P40818 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
USP8P40818 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP8P40818 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.04■□□□□ 0.96
USP8P40818 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP8P40818 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.04■□□□□ 0.96
USP8P40818 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms