Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
XPAP23025 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
XPAP23025 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.57■□□□□ 0.72
XPAP23025 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.57■□□□□ 0.72
XPAP23025 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.57■□□□□ 0.72
XPAP23025 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.57■□□□□ 0.72
XPAP23025 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
XPAP23025 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
XPAP23025 AL445675.2-201ENST00000620291 557 ntBASIC19.57■□□□□ 0.72
XPAP23025 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.57■□□□□ 0.72
XPAP23025 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
XPAP23025 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.57■□□□□ 0.72
XPAP23025 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XPAP23025 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
XPAP23025 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.56■□□□□ 0.72
XPAP23025 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.56■□□□□ 0.72
XPAP23025 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.56■□□□□ 0.72
XPAP23025 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XPAP23025 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.55■□□□□ 0.72
XPAP23025 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.55■□□□□ 0.72
XPAP23025 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
XPAP23025 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.55■□□□□ 0.72
XPAP23025 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.55■□□□□ 0.72
XPAP23025 NUDT16P1-203ENST00000513809 620 ntBASIC19.55■□□□□ 0.72
XPAP23025 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.55■□□□□ 0.72
XPAP23025 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 PCDHAC2-203ENST00000615316 3011 ntBASIC19.55■□□□□ 0.72
XPAP23025 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.55■□□□□ 0.72
XPAP23025 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
XPAP23025 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XPAP23025 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
XPAP23025 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.54■□□□□ 0.72
XPAP23025 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.54■□□□□ 0.72
XPAP23025 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.54■□□□□ 0.72
XPAP23025 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
XPAP23025 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
XPAP23025 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.54■□□□□ 0.72
XPAP23025 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.54■□□□□ 0.72
XPAP23025 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XPAP23025 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.54■□□□□ 0.72
XPAP23025 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.53■□□□□ 0.72
XPAP23025 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.53■□□□□ 0.72
XPAP23025 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
XPAP23025 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
XPAP23025 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms