Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 C1QL1P1-201ENST00000568105 661 ntBASIC19.58■□□□□ 0.72
HLA-DPA1P20036 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 AC110285.5-201ENST00000611501 352 ntBASIC19.58■□□□□ 0.72
HLA-DPA1P20036 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 KRT16P5-201ENST00000455284 522 ntBASIC19.57■□□□□ 0.72
HLA-DPA1P20036 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 AC005332.7-201ENST00000614046 2005 ntBASIC19.57■□□□□ 0.72
HLA-DPA1P20036 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPA1P20036 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPA1P20036 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 KRT18P29-201ENST00000397031 1267 ntBASIC19.55■□□□□ 0.72
HLA-DPA1P20036 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 C1QBPP2-201ENST00000528754 825 ntBASIC19.55■□□□□ 0.72
HLA-DPA1P20036 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 TMEM191A-211ENST00000637163 1067 ntBASIC19.55■□□□□ 0.72
HLA-DPA1P20036 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 AC007952.6-201ENST00000573168 2673 ntBASIC19.55■□□□□ 0.72
HLA-DPA1P20036 AC003957.1-201ENST00000625108 2673 ntBASIC19.55■□□□□ 0.72
HLA-DPA1P20036 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPA1P20036 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms