Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF4P18848 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 TCF3P1-201ENST00000423021 1937 ntBASIC16.19■□□□□ 0.18
ATF4P18848 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ATF4P18848 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATF4P18848 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF4P18848 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF4P18848 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF4P18848 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.18■□□□□ 0.18
ATF4P18848 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATF4P18848 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATF4P18848 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF4P18848 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF4P18848 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF4P18848 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 AC093484.2-201ENST00000580996 2166 ntBASIC16.17■□□□□ 0.18
ATF4P18848 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.17■□□□□ 0.18
ATF4P18848 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF4P18848 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.17■□□□□ 0.18
ATF4P18848 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATF4P18848 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.17■□□□□ 0.18
ATF4P18848 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.17■□□□□ 0.18
ATF4P18848 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF4P18848 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF4P18848 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF4P18848 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF4P18848 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.16■□□□□ 0.18
ATF4P18848 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF4P18848 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF4P18848 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATF4P18848 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF4P18848 BX842568.3-201ENST00000418104 571 ntBASIC16.16■□□□□ 0.18
ATF4P18848 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.16■□□□□ 0.18
ATF4P18848 MIR6821-201ENST00000617625 74 ntBASIC16.16■□□□□ 0.18
ATF4P18848 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 AL162727.3-201ENST00000635661 2787 ntBASIC16.16■□□□□ 0.18
ATF4P18848 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF4P18848 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms