Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARBP10826 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARBP10826 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.74■■□□□ 1.07
RARBP10826 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARBP10826 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARBP10826 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARBP10826 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
RARBP10826 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RARBP10826 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RARBP10826 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARBP10826 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RARBP10826 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RARBP10826 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.73■■□□□ 1.07
RARBP10826 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARBP10826 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARBP10826 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.73■■□□□ 1.07
RARBP10826 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.73■■□□□ 1.07
RARBP10826 PRSS44-201ENST00000515154 1146 ntBASIC21.73■■□□□ 1.07
RARBP10826 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.73■■□□□ 1.07
RARBP10826 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.73■■□□□ 1.07
RARBP10826 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.73■■□□□ 1.07
RARBP10826 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARBP10826 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.73■■□□□ 1.07
RARBP10826 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.72■■□□□ 1.07
RARBP10826 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.72■■□□□ 1.07
RARBP10826 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RARBP10826 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 DUSP5P1-201ENST00000441325 1139 ntBASIC21.72■■□□□ 1.07
RARBP10826 HCG4P8-203ENST00000443049 980 ntBASIC21.72■■□□□ 1.07
RARBP10826 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARBP10826 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.72■■□□□ 1.07
RARBP10826 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RARBP10826 AC116407.4-201ENST00000623319 1061 ntBASIC21.72■■□□□ 1.07
RARBP10826 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RARBP10826 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.72■■□□□ 1.07
RARBP10826 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RARBP10826 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.72■■□□□ 1.07
RARBP10826 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
RARBP10826 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.72■■□□□ 1.07
RARBP10826 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RARBP10826 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RARBP10826 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.71■■□□□ 1.07
RARBP10826 AP001271.2-201ENST00000624018 1556 ntBASIC21.71■■□□□ 1.07
RARBP10826 BX119927.1-201ENST00000636596 1552 ntBASIC21.71■■□□□ 1.07
RARBP10826 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RARBP10826 AP000523.1-201ENST00000398242 1049 ntBASIC21.71■■□□□ 1.07
RARBP10826 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
RARBP10826 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RARBP10826 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RARBP10826 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
RARBP10826 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARBP10826 LINC01465-201ENST00000408887 1940 ntBASIC21.7■■□□□ 1.07
RARBP10826 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 AL450487.1-201ENST00000426799 995 ntBASIC21.7■■□□□ 1.06
RARBP10826 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.7■■□□□ 1.06
RARBP10826 KRT18P38-201ENST00000449496 1282 ntBASIC21.7■■□□□ 1.06
RARBP10826 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.7■■□□□ 1.06
RARBP10826 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 AC069148.1-201ENST00000608741 768 ntBASIC21.7■■□□□ 1.06
RARBP10826 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.7■■□□□ 1.06
RARBP10826 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RARBP10826 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 KRT8P45-201ENST00000414328 1447 ntBASIC21.7■■□□□ 1.06
RARBP10826 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.7■■□□□ 1.06
RARBP10826 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARBP10826 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.7■■□□□ 1.06
RARBP10826 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RARBP10826 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms